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Published 20 hours ago • verified publisher icon Illumina

grmpy error: [E::cram_itr_query]

Open jasonbhn opened this issue 2 years ago • 0 comments

Hi, I'm running paragraph on 1 sample and it returned this error:

[E::cram_itr_query] Query with tid=-1 not implemented for CRAM files
Aborted (core dumped)

What does this mean? It feels like something from htslib. I have about 1000 cram files and there are 6 of them that all failed with this error...

Thanks.

jasonbhn avatar Oct 23 '21 00:10 jasonbhn