Finished install but can't run the demo

[eeleclair]

Hi there,

After an entire working day I got through the build, make and install with no errors. But now when i try to run the demo it says I need to install the 'workflow', which seems a paradox as I just installed it:

[ 98%] Built target MergeSVLoci [ 98%] Built target SummarizeAlignmentStats [ 98%] Built target SummarizeSVLoci [100%] Built target TestAssembler Install the project...

The developers' instructions are to use this command to run the demo:

python ${MANTA_INSTALL_PATH}/bin/runMantaWorkflowDemo.py

I am running Python in Ubuntu so from my user directory I typed python3 first on the command line. I used the 'locate' command to verify the complete path of the .py file so I assumed python would find it and run. But I get an error.

$ python3 manta-1.6.0.release_src/src/demo/runMantaWorkflowDemo.py ERROR: Manta workflow must be installed prior to running demo.

If I go one level deeper into the "build" directory and type the same command I get a 'file not found':

build$ python3 manta-1.6.0.release_src/src/demo/runMantaWorkflowDemo.py python3: can't open file 'manta-1.6.0.release_src/src/demo/runMantaWorkflowDemo.py': [Errno 2] No such file or directory

So something is not pointing to the correct place, what do I do?

[deb0612]

I giot the same error

[trinidadmartin]

Hello!! If everything went fine with installation after make -j4 install then you should have another folder manta-1.6.0-release/bin Go inside bin and you should find the runMantaWorkflowDemo.py I hope it helps ;) Trini