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Published 20 hours ago • verified publisher icon Illumina

Problem related to the pre-installed software and packages

Open katerinaoleynikova opened this issue 3 years ago • 5 comments

Good day,

Thank you so much for the tools! I've constructed the pipeline consisted of EH -> .. -> REViewer and got the problem that both EH and REViewer install the same soft and packages (for instance, Boost). Moreover, I've installed them on my own. It would be great to skip a soft installation step in cases when it is already done.

katerinaoleynikova avatar Mar 19 '21 08:03 katerinaoleynikova

Thanks for the suggestion! We could let users specify paths to Boost and HTSlib if they are already installed on their system.

egor-dolzhenko avatar Mar 22 '21 05:03 egor-dolzhenko

Ok, thank you.

katerinaoleynikova avatar Mar 22 '21 08:03 katerinaoleynikova

Any progress here?

serge2016 avatar May 29 '21 16:05 serge2016

Any progress here?

I suppose it would be done in the next release.. I've been following this, don't worry :D

katerinaoleynikova avatar May 31 '21 08:05 katerinaoleynikova

Hello, any news here? I saw release https://github.com/Illumina/REViewer/releases/tag/v0.2.4 2 weeks ago but nothing about external boost support (current release is 1.77.0 but bundled only 1.73.0)

Stikus avatar Sep 02 '21 07:09 Stikus