Ilarius

It's ovarian cancer: first sample has 71634 initial cells and the second one 73644. That's because I only load a matrix with cells with at least 200 features otherwise I...

I did not use norm cells because the documentation says: "norm_cells : Vector of normal cells if the classification is already known and you are only interested in the clonal...

hello, did you solve this issue?

I think the problem is that combat gives you very big numeric values that become NAs when converted in integer by DESeq2. There is an unsolved issue about that

anyone figured this out? I have the same problem even if just using group and not covar_mod. I am getting like 898183362094 as max value!

Hello, maybe this could be computed from the value used for the generation of the heatmap. @AntonioDeFalco what do you think? It would be really nice to have a score,...