Iammaai

Results 8 comments of Iammaai

Hi!Thank you very much for your answer! The version of matplotlib I used was 3.7.2.After I changed the version of matplotlib to 3.7.3 as you said, the result is still...

> Hi! Quick question, which python version and cell2cell version are you using? You might need creating a new environment with proper versions I think. This could be a good...

> I think before trying a new environment you should try updating cell2cell to the latest version (0.7.4), the legend issue was solved in v0.7.0 (see [notes here](https://github.com/earmingol/cell2cell/blob/master/release/0.7.0-notes.md)). I think...

> Can you show me what error you get with the new pandas version? I could generate a quick fix for that to allow compatibility. Anyways, I don't think you...

> Oh this issue shouldn't happen with the latest version of cell2cell, it was already fixed :) so feel free to update pandas if you want Thank you very much...

Hello, Sorry to bother you again! As my data is only tensor-cell2cell and the result is not good, I plan to use LIANA combined with tensor-cell2cell method, but there are...

> Looks like you data have duplicated gene names. You could try using `adata.var_names_make_unique()` before running the pipeline. Hello, I have tried this operation and the results show that there...

Hello,I updated the version of liana to 1.3.0 and the error was resolved!Thank you for your kind reply!