ontology-development-kit
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INCATools
Bootstrap an OBO Library ontology
Right now, you cant drop base/full artefacts from the config.
``` gh auth login --with-token < mytoken.txt ``` See https://cli.github.com/manual/gh_auth_login Else we cant use the shiny new deploy release step
Problem: figure out how to persist credentials
see https://github.com/ontodev/robot/issues/893
The ODK could/should provide better options to visualise diffs between two versions of an ontology, either locally (on the editor’s machine) or on GitHub. This is especially important for ontologies...
Maybe that is correct. Currently, only ROBOT reports are run as part of the release pipeline.
Standard release layout (proposed) * ont * xrefs * ont-xref-ext1.{obo,owl,tsv} * ont-xref-ext2.{obo,owl,tsv} * ... Note that sometimes we also release skos mappings (with semi-loose broad/narrow/exact semantics), and sometimes equivalence (owl)...
Right now, running ontology preprocessing is cumbersome, in fact, not really possible: we kinda have to apply any changes like taxon constraint materialisation and others in complex custom chains, and...