Karin Hrovatin
Karin Hrovatin
Currently the Python Script widget prints to the console only after it has finished running and there is no indicator of whether it is running or not. It should be...
- [ x] Additional function parameters / changed functionality / changed defaults? - [ ] New analysis tool: A simple analysis tool you have been using and are missing in...
- [ x] Additional function parameters / changed functionality / changed defaults? - [ ] New analysis tool: A simple analysis tool you have been using and are missing in...
- [x] I have checked that this issue has not already been reported. - [ ] I have confirmed this bug exists on the latest version of scanpy. - [...
My legend color elements overlap legend text - it used to work before, but now when I re-run this started to happen, not sure why. Also, the gap param in...
I tried to run diffxpy with tf1 and normal noise. However, I get the below error. ``` import diffxpy.api as de from anndata import AnnData import pandas as pd import...
I tried to model a single gene across different cell types with diffxpy, but I get the below error. Today I switched to latest dev, but the same also happens...
I have run a DE test where I have multiple continuous predictor variables (one of interest and multiple covariates). Sometimes I got really low reported log2fc (that would be filtered...
Sometimes I get unexpectedly high estimates with very small standard deviation, see below. These estimates are not in accordance to expected lFC, but are significant. (Image: fitted log2fc is equal...
In wald test it says that: "constraints_loc: Array with constraints in rows and model parameters in columns. Each constraint contains non-zero entries for the a of parameters that has to...