Pierre-Edouard Guerin

icon indicating a website link https://guerinpe.com icon indicating an email [email protected]

icon company Florimond Desprez Group icon location France icon location Computational biology

Results 4 comments of Pierre-Edouard Guerin

ne_download URL strange/wrong

Same issue with Windows 10 rnaturalearth 0.1.0. and r 4.3 ``` trying URL 'http://www.naturalearthdata.com/http//www.naturalearthdata.com/download/50m/physical/ne_50m_coastline.zip' Error in utils::download.file(file.path(address), zip_file

add rfishbase as a conda environment with Anaconda cloud

The best will be to find it on anaconda/miniconda cloud Here the link: https://anaconda.org/ Apparently the process seems to be pretty straightforward

connect to GitLab just as to GitHub

Yes please !

ncbiquery fuzzy support not compiled when installed via pip install

Got this error with ete 3.1.2 ``` Traceback (most recent call last): File "", line 1, in File "/home/pguerin/miniconda3/envs/pylib_cbdr/lib/python3.9/site-packages/ete3/ncbi_taxonomy/ncbiquery.py", line 165, in get_fuzzy_name_translation _db.execute("select load_extension('%s')" % os.path.join(module_path, sqlite3.OperationalError: /home/pguerin/miniconda3/envs/pylib_cbdr/lib/python3.9/site-packages/ete3/ncbi_taxonomy/SQLite-Levenshtein/levenshtein.sqlext.so: cannot...