Moheb Ghobrial

show.velocity.on.embedding.cor -error: libgomp: Out of memory allocating

1

Dear all, I am trying to run velocity analysis on my sample, following the seurat-wrappers/velocyto.R tutorial. Everything goes smoothly till the step where I have to plot the velocity vector:...

show.velocity.on.embedding.cor -error: libgomp: Out of memory allocating

2

Dear all, I am trying to run velocity analysis on my sample, following the seurat-wrappers/velocyto.R tutorial. Everything goes smoothly till the step where I have to plot the velocity vector:...

error loading Nanosctring CosMx dataset

2

Hi, good day. Thank you for the very nice package. I have an issue loading the Nanostring CosMx dataset: [Nanosctring CosMx dataset](https://nanostring.com/products/cosmx-spatial-molecular-imager/human-frontal-cortex-ffpe-dataset/?mkt_tok=NzAwLUpZRi0xNzEAAAGOSsg2hyHYrN92QqO6ubV-6rcqX2TYhdJlPmIMX7YcRgCxbHZxX0GUkA08o1-A8i38k1KFyzk8LR_1v0i9mQg1OqxS7p520rcuRbPYQ_6tDZfMkQ) Here is the error I am getting: Traceback...

using cellchat with Xenium data

3

Hi @sqjin Just wanted to ask, if it is possible to use cellchat with Xenium data Thanks