GeonhoCho

Error --pilon polish contigs

1

Hello, i am running the following command: #!/bin/bash #SBATCH -J metacom_CJ_Car #SBATCH -t UNLIMITED #SBATCH -p Node2 #SBATCH -n 12 python3 /home/geonho/tools/MetaCompass-2.0-beta/go_metacompass.py -r /home/geonho/WGS/REF_ACP/REF_GENOMES/C_rudii_JRPAMB4_complete_genome_NZ_CP041245/ACP_C_rudii.ref.fas -1 /home/geonho/WGS/trimmed/CJ_S7_L003_R1_001.fastq.gz -2 /home/geonho/WGS/trimmed/CJ_S7_L003_R2_001.fastq.gz -o /home/geonho/WGS/trimmed/metacompass/Carsonella/CJ...