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An information-theoretic pipeline for methylation analysis of WGBS data

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Hello, I followed instructions for installation but I have the following error. Could you please clarify whether computeAveLogLikelihood was supposed to have been compiled to mex? Thanks! ------------------------------------------------------------------------------------------------------- cd informME/src/bash_src/informME_run/main...

Hi, my bam files have been generated based on bismark v0.22.1. It doesn't seem to fit the script since it has been built on bismark v0.12.3 I am aligning one...

After running both "singleMethAnalysisToBed" and "diffMethAnalysisToBed", it gives me output files listing only results for chr1. I tried specifying as minchr 1 and maxchr 22 (even if it's the default...

help wanted
targeted bs?

Dear sir, While I was installing the informME, I encountered a problem. Could you give me any advice? Thank you very much. ``` #path IPATH="/**/program/informME-master" MATLICE="/**/program/matlab/dir_install/licenses/license_standalone.lic" PATH1="/**/program/informME-master/others/eigen/install" PATH2="/**/program/informME-master/others/mpfr-3.1.6" ``` Firstly,...

enhancement

Hi! And thanks for your work By any chance, would you have a docker image / Dockerfile ready to run the library? I'm encountering a lot of trouble running it,...