GHosking-01

Hi, I am particulary interested in the protein sequence generated by fusioncatcher. I have been unable to match the fusion sequence to the predicted fused transcript or the predicted fused...

Hi, I have been attempting to explore some MHCII alleles for Balb-c mice. I read in the file below with fread (from data.table) and ran garnish affinity on the data...

Antigen.garnish missing columns in output file with fusion peptides

4

Hi, I am attempting to use antigen garnish to predict neoantigens from fusion proteins predicted by arriba/starfusion/fusioncatcher. I took the predicted peptides from those programs (quite long, minimum of 60...