simka
simka copied to clipboard
Simka and SimkaMin are comparative metagenomics methods dedicated to NGS datasets.
Hi, I am not sure how to run a lot of samples on different computer node at the same time and then pool those result to calculate distance matrix any...
Hello, Simka has been packaged[1] from the Debian Med Team. However, there is a regression only on Arm64 architecture that is stopping unstable to testing migration. I'd rather sort this...
Hi, I am wondering if it is possible to visualise a subsample of the simka results instead of all of the output. Thanks, George
Inches
Dear developers, I find really strange to set the figures in inches. The SI system is in meters, even NASA performs science in meters. Can we have at least the...
As it misses the .git folder in the release archive of the source, the commands `git submodule init` and `git submodule update` from the INSTALL file fail each with the...
Fails to run
lala [0.0%] Computing k-mer spectrums [Time: 0:00:00]A job failed (simka_test_tmp/simka_database/kmer_spectrums/A/), exiting simka
My test is stuck since one hour at: [Merging datasets ] 81.8 % elapsed: 0 min 1 sec remaining: 0 min 0 sec cpu: 0.0 % mem: [ 11, 11,...