Can't open object can't open my reads

[FengqingWang0712]

Hi there, I built an input file of my reads. It said can't read my reads with the same error when I ran simka. The example tested successfully. Could someone show me where the problem is? Thanks very much!

Here is the error:

Creating input

Nb input datasets: 1

HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0:

#000:

/scratch/fwang/simka-v1.5.3-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5A.c

line 425 in H5Aopen(): unable to load attribute info from object header

for attribute: 'version'

 major: Attribute

 minor: Can't open object

#001:

/scratch/fwang/simka-v1.5.3-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5Aint.c

line 433 in H5A__open(): unable to load attribute info from object

header for attribute: 'version'

 major: Attribute

 minor: Can't open object

#002:

/scratch/fwang/simka-v1.5.3-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oattribute.c

line 515 in H5O__attr_open_by_name(): can't locate attribute: 'version'

 major: Attribute

 minor: Object not found

HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0:

#000:

/scratch/fwang/simka-v1.5.3-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5A.c

line 704 in H5Aget_space(): not an attribute

 major: Invalid arguments to routine

 minor: Inappropriate type

HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0:

#000:

/scratch/fwang/simka-v1.5.3-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5S.c

line 1013 in H5Sget_simple_extent_dims(): not a dataspace

 major: Invalid arguments to routine

 minor: Inappropriate type

HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0:

#000:

/scratch/fwang/simka-v1.5.3-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5A.c

line 662 in H5Aread(): not an attribute

 major: Invalid arguments to routine

 minor: Inappropriate type

ERROR: Can't open dataset: ID1

Here are the IDs of my reads as input:

ID1: 2018031910_paired_1.fasta ; 2018031910_paired_2.fasta

ID2: 201803193_paired_1.fasta ; 201803193_paired_2.fasta

ID3: 20180319_paired_1.fasta ; 20180319_paired_2.fasta

ID4: 20180403_paired_1.fasta ; 20180403_paired_2.fasta

ID5: 20180405_paired_1.fasta ; 20180405_paired_2.fasta

ID6: 20180410_paired_1.fasta ; 20180410_paired_2.fasta

ID7: 2018041210_paired_1.fasta ; 2018041210_paired_2.fasta

ID8: 201804123_paired_1.fasta ; 201804123_paired_2.fasta

ID9: 20180412_paired_1.fasta ; 20180412_paired_2.fasta

ID10: 2018041710_paired_1.fasta ; 2018041710_paired_2.fasta

ID11: 201804173_paired_1.fasta ; 201804173_paired_2.fasta

ID12: 20180417_paired_1.fasta ; 20180417_paired_2.fasta

ID13: 20180419_paired_1.fasta ; 20180419_paired_2.fasta

ID14: 20180424_paired_1.fasta ; 20180424_paired_2.fasta

ID15: 2018042610_paired_1.fasta ; 2018042610_paired_2.fasta

ID16: 201804263_paired_1.fasta ; 201804263_paired_2.fasta

ID17: 20180426_paired_1.fasta ; 20180426_paired_2.fasta

ID18: 20180502_paired_1.fasta ; 20180502_paired_2.fasta

ID19: 20180503_paired_1.fasta ; 20180503_paired_2.fasta

ID20: 2018050810_paired_1.fasta ; 2018050810_paired_2.fasta

ID21: 201805083_paired_1.fasta ; 201805083_paired_2.fasta

ID22: 20180508_paired_1.fasta ; 20180508_paired_2.fasta

ID23: 2018051110_paired_1.fasta ; 2018051110_paired_2.fasta

ID24: 201805113_paired_1.fasta ; 201805113_paired_2.fasta

ID25: 20180511_paired_1.fasta ; 20180511_paired_2.fasta

ID26: 20180515_paired_1.fasta ; 20180515_paired_2.fasta

ID27: 20180517_paired_1.fasta ; 20180517_paired_2.fasta

ID28: 2018052210_paired_1.fasta ; 2018052210_paired_2.fasta

ID29: 201805223_paired_1.fasta ; 201805223_paired_2.fasta

ID30: 20180522_paired_1.fasta ; 20180522_paired_2.fasta

ID31: 20180524_paired_1.fasta ; 20180524_paired_2.fasta

ID32: 2018052910_paired_1.fasta ; 2018052910_paired_2.fasta

ID33: 201805293_paired_1.fasta ; 201805293_paired_2.fasta

ID34: 20180529_paired_1.fasta ; 20180529_paired_2.fasta