Results 39 comments of Fred

Hi, Picard has a PR that allows to work with CSI index (from https://github.com/samtools/htsjdk/pull/1040) https://github.com/broadinstitute/picard/pull/998 But I need htsjdk to be able to write CSI as well (example of Wheat...

Thank you for all these comments. I'm not sure that my skills (java and computing) will be enough, but I'm still ready to help. Of course I'm stuck at home...

Hello I failed when trying to compile Diamond (my os is quite old, I can not use the binaries `version 'GLIBC_2.17' not found`...) So I managed to install `2.0.8` using...

Here is a gist file with my compilation issues: [Diamond 2.0.8 compilation issues. (CentOS release 6.6 (Final)) ](https://gist.github.com/FredericBGA/4ac1456f19678a7226914bcbc3d6a84c) I hope you will be able to help me. Otherwise I will...

Thank you for your help. I've installed GCC 10.2.0 without having seen any errors. But the compilation still fails with the same type of errors. So either I've an issue...

Hi, a quick reply to say that I managed to compile diamond. My issue was related to a lack of `binutils` tools.

It would be so great to retrieve the [GGB behavior](http://gmod.org/wiki/GBrowse_Configuration/Authentication#Restricting_Access_to_Datasources_with_GBrowse_Account_Database) > [5_prime_RACE] >glyph = generic >feature = RACE:5_prime > restrict = require user fred joseph andrea marta and of course...

@rdhayes thank you for your help. But it does not fit all I need. I think that with an .htaccess file, the track will be still displayed, I would like...

The error was: > Output directory '.' is not writable. > at /softs/bioinfo/jbrowse-1.16.10-release/bin/../src/perl5/Bio/JBrowse/ConfigurationManager.pm line 7. > Bio::JBrowse::ConfigurationManager::__ANON__("Output directory '.' is not writable.\x{a}") called at /softs/bioinfo/jbrowse-1.16 > .10-release/bin/../src/perl5/Bio/JBrowse/Cmd/IndexNames.pm line 73 >...

Sorry, my explanations (and the title) are confusing. I would like to be able to display the same feature type from different sources ie: SNPs from one project 1 and...