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I'm working through the remaining decommisioning of the Data Generation section. Now the last things that are remaining before full decom is the biospecimen banking which is being addressed in...

vortexing

### URL of existing content (a rendered, sciwiki.fredhutch.org link) https://sciwiki.fredhutch.org/datascience/hutch_courses/#wdl-101 ### Specific information requests or concerns, or specific region on page of content to refresh. We should update this text...

vortexing

**Proposed Domain** Scientific Computing **Content Summary** Add a code snippet and explanation of using a Python virtual environment into a Slurm batch script. [See also](https://github.com/FredHutch/wiki/pull/935) **Local Content Expert(s)**

atombaby

atombaby

"check_for_orphan_assets" gitlab task breaks build

4

This task wants to run `gh` to file an issue, but this requires first running `gh auth login`. That shouldn't be too hard (need to log in as a service...

dtenenba

Add author contribution list to bottom of each page

2

Long term goal: On the bottom of each page, render a list of the users who have commits on the master branch with edits to the file that makes each...

vortexing

Do we have shared reference datasets that we can use for bioinformatics?

2

**Proposed Domain** Scientific Computing - New page in Reference and Announcements? ReferenceDataSets.md **Content Summary** Where can I find reference data sets for my computational work that are already available in...

vortexing

What is the best practice for long term storage of data containing PHI

6

**Proposed Domain** Specify where should the new content should go (Data Generation or Scientific Computing), including a recommended subsection. Data Generation - https://sciwiki.fredhutch.org/generation/gen_index/ This came out of a discussion Lauren...

Chilliwack

Consider integrating the AWS Lambda commit into gitlab

3

Right now last modified dates are continuously updated vi an automated commit after a AWS Lamba process. We should consider sometime integrating that into the newer GitLab build process so...

vortexing

Installing R packages from GitHub

8

### URL of existing content (a rendered, sciwiki.fredhutch.org link) https://sciwiki.fredhutch.org/scicomputing/compute_scientificSoftware/ https://sciwiki.fredhutch.org/rModules/ ### Specific information requests or concerns, or specific region on page of content to refresh. How can users install...

k8hertweck