Rafael Navaza

Results 6 comments of Rafael Navaza

> But I hope you would please consider making it a native feature :) Here's a simple way to transpose a CSV with Miller: ```sh mlr --csv -N put -q...

There's also a bonding problem for coarse-grained DNA/RNA chains. For two backbone atoms to make a bond, the max distance between them is set to `√48 A` in the code;...

Thank you for the reply. So that condition is meant to prevent DNA chains in some older PDBs to be recognized as RNA chains? A possible solution could be to...

@ppillot I'm not sure what you call a "public coarse grained RNA structure" but here's an example that works with my "patched" version of `ngl.js`: http://www.dynstr.pasteur.fr/servers/minactionpath/minactionpath2_submission/examples/8G34_to_8G31/ If you load the...

Hi eric-jm-lang, I successfully built and ran CHAP, linked to GROMACS 2018.8, with everything compiled with Intel Compilers 2018.3 and Intel MKL 2018.3. First you would need to apply the...