Florian Wuennemann

I tried running knn.error.models and it seems to calculate error models correctly when using `linear.fit=TRUE` When setting linear fit to false, it will still give the same error. ``` Error...

Sorry, so the multicore module still fails for me at this point. I think I am using it wrong. How exactly do I have to implement the papply solution? I...

So I have been trying around with this a bit now and have not found a solution. Single core on my cells takes way too long. The error seems to...

Just ran the tests and it seemed to execute all of them without any problems... > t1 Time difference of 10.03305 secs > t2 Time difference of 1.132771 secs >...

Absolutely, the.singularity folder contains 2 folders: - dynverse - Empty - cache - Three subfolders 1) oci, 2)oci-tmp, 3) shub

Thanks for the fix @rcannood . I tried your suggestion but I am running into another error now: > model parse_dataset -> normalise Execution halted Error: Error during trajectory inference...

Works like a charm now! Thank you so much for fixing this issue so quickly! I tried with 3 different methods ("angle", "slingshot" and "scorpius") which all worked! You can...

Sorry for bringing up a small problem after closing the issue. I hadn't tested the fix on our HPC environment. On the HPC I now get the following error when...

Yes of course. I did try this before the fix and all the checks passed. I retried now after the fix and all the checks still pass! > dynwrap::test_singularity_installation(detailed =...

Hi @zouter , thanks for helping to troubleshoot this issue! I ran `singularity exec 'docker://dynverse/ti_slingshot:v0.9.9' echo hi` in the command line on the HPC login node and this was the...