Fanyu Meng

TypeError: Passing a set as an indexer is not supported. Use a list instead.

5

Hello, I encoutered a warning today with this code interactions = c2c.analysis.SingleCellInteractions(rnaseq_data=rnaseq.to_df().T, ppi_data=lr_pairs, metadata=meta, interaction_columns=('ligand_symbol', 'receptor_symbol'), communication_score='expression_thresholding', expression_threshold=0.1, # values after aggregation cci_score='bray_curtis', cci_type='undirected', aggregation_method='nn_cell_fraction', barcode_col='index', celltype_col='celltype', complex_sep='&', verbose=False) And...