fur

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Error when making fur regarding stream

3

Hello, thanks for creating fur. I have some trouble with the install of fur. When I use the make command, I get the following error: make[1]: Entering directory '/mnt/c/Users/Paco/Desktop/fur/stream' awk...

PacoRM24

Issues on esa

6

Dear author, When building the bin file "makeFurDB", there is an error "package github.com/evolbioinf/esa: build constraints exclude all Go files in /home/xiayao/tools/fur/makeFurDb/esa". I do not have root access. Is there...

xy-repo

How to select the neighbors genomes?

8

Hi, Thanks for developing this software. I would like to ask how to select the neighbors genomes. Sometimes there are no sequences in the results of fur. Thanks.

wangzhichao1990

Error when making fur

4

Hello, thanks for making and sharing Fur! Please could you help me with an error that occurs when I try to install fur? I have installed make, gloang, noweb and...

salientrob

When there is a lot of contigs, makeFurDb is very slow

1

Hi, When there are a lot of contigs, makeFurDb is very slow. The following figure shows the statistical results of the neighbor genomes.  Is there a way to increase...

wangzhichao1990

Bug in tutorial

1

Hi, I am following the tutorial for real data, and at page 85, section 84c, I get the follow error while running `fur -d eco105.db/ > eco105.fasta` ```console fur -...

willros

error in fur: efopen

2

i am facing this error while running fur, no clue where i did wrong. # Step Sequences Nucleotides Mutations (N) # ------------------------------------------------------------- # Sliding window 0 0 0 error in...

KarthikStrange

Method of choosing index target representative

1

Is there a method of choosing the index target representative for the macle index when running makeFurDb?

ethan-mcq

Can not read fasta files

5

Hi, Thanks for publishing this software. I encountered the problem of reading fasta file. The targets and neighbors are Salmonella enterica but differed from serovar. The sample are all from...

3miumi

Package error in docker image: fur: error while loading shared libraries: libgsl.so.25: cannot open shared object file: No such file or directory

2

Hi author, I just download tutorial data and follow the exact step of document fur.pdf. When I run docker `sudo docker container run -v --detach-keys="ctrl-@" -h fox -it haubold/fox `...

minhtrung1997