fur
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error in fur: efopen
i am facing this error while running fur, no clue where i did wrong.
Step Sequences Nucleotides Mutations (N)
-------------------------------------------------------------
Sliding window 0 0 0
error in fur: efopen, can't open /home/mrstrange/SSPD1/furDb/p.fasta.
makeFurDb -t /home/mrstrange/SSPD1/target/ -n /home/mrstrange/SSPD1/neighbour/ -d /home/mrstrange/SSPD1/furDb
Reading data...done.
Making macle index with target representative "/home/mrstrange/SSPD1/target/MK760666.1.fasta"...done.
Making BLAST database...done. make furDb executed properly
In your analysis there is no output from the sliding window step. So the next step fails. It should perhaps fail more gracefully, but there we are.