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error in fur: efopen

Open KarthikStrange opened this issue 1 year ago • 2 comments

i am facing this error while running fur, no clue where i did wrong.

Step Sequences Nucleotides Mutations (N)

-------------------------------------------------------------

Sliding window 0 0 0

error in fur: efopen, can't open /home/mrstrange/SSPD1/furDb/p.fasta.

KarthikStrange avatar Jul 24 '23 09:07 KarthikStrange

makeFurDb -t /home/mrstrange/SSPD1/target/ -n /home/mrstrange/SSPD1/neighbour/ -d /home/mrstrange/SSPD1/furDb

Reading data...done.

Making macle index with target representative "/home/mrstrange/SSPD1/target/MK760666.1.fasta"...done.

Making BLAST database...done. make furDb executed properly

KarthikStrange avatar Jul 24 '23 09:07 KarthikStrange

In your analysis there is no output from the sliding window step. So the next step fails. It should perhaps fail more gracefully, but there we are.

haubold avatar Jul 24 '23 15:07 haubold