Max Brown
Max Brown
Can verify also that downgrading samtools also worked for me...
I don't know if this is a good first issue or not, but if I were to be given a little direction, I might be able to poke around in...
I think to implement this will require a bit of an overhaul of the plugin system; at the very least perhaps an entire separate system to implement an infinite stream....
I have quite noisy, low quality but very long reads to align. I thought the `--global-alignment` option would be good for this. Do you recommend this? Or any other parameters?...
Hi Rich, Thanks for the comment! I'll leave this issue open, and link your tool in the main README.md. Happy to see it's being used like this! Cheers, Max
Also potentially remove simple satellite repeats from output? e.g. ACACACACACACACACAC Which are unlikely to be telomeric repeats?
Hi Colin, Thanks for the report. Are you trying to plot from `explore` or `search`? Plot only really works for `search` output. Two more things: - which version of tidk...
Thanks for this, super helpful. I'll check the file you have given later but I am pretty sure this is the correct behaviour. I could implement a log y-scale if...
Hello, thanks for the issue! So, I haven't updated the bioconda to the latest version of tidk which is in this repository yet, as I'm making a couple more changes...
Thanks Colin - looks like I'm overshooting the end coordinate due to rounding. This looks not too hard to fix luckily!