Niffler

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A composable workflow module

1

Currently, the processes are scheduled manually or the workflows are developed manually per each execution. This workflow module will enable chaining of processes: One common workflow is, cold-extraction -> png-extraction,...

pradeeban

This is slightly tricky since Niffler is not just Python. Among the modules, the below are in Python: * cold-extraction * dicom-anonymization * meta-extraction * nifti-extraction * png-extraction * rta-extraction...

pradeeban

Spotted with DICOMs of 1.1TB and 1000 metadata files (small files).

pradeeban

Support both YYYY and YY for accession

4

PACS stores AccessionNumber as a string with the year in YY format compared to other clinical systems with the year in YYYY format. This variance in representations raises the problem...

pradeeban

Better configurations for Destination AE to be different from Query AE

1

Niffler will need some modification that when we use an external AE to store the images, storescp does not need to be stared locally. I will create a bug report...

pradeeban

A service framework deployment might help with more visibility across communities such as Libre Health.

pradeeban

Currently, Niffler png-extraction is containerized (#262). However, other modules are not containerized. What we propose is a global Niffler container from where different modules can be executed. While this can...

pradeeban

Bumps [werkzeug](https://github.com/pallets/werkzeug) from 2.2.3 to 3.0.1. Release notes Sourced from werkzeug's releases. 3.0.1 This is a security release for the 3.0.x feature branch. Changes: https://werkzeug.palletsprojects.com/en/3.0.x/changes/#version-3-0-1 3.0.0 This is a feature...

dependabot[bot]

Bumps [pillow](https://github.com/python-pillow/Pillow) from 9.3.0 to 10.0.1. Release notes Sourced from pillow's releases. 10.0.1 https://pillow.readthedocs.io/en/stable/releasenotes/10.0.1.html Changes Updated libwebp to 1.3.2 #7395 [@​radarhere] Updated zlib to 1.3 #7344 [@​radarhere] 10.0.0 https://pillow.readthedocs.io/en/stable/releasenotes/10.0.0.html Changes...

dependabot[bot]

Rethinking how Niffler handles multiple query sources at once

1

Currently, we support querying multiple sources by running ColdDataRetriever twice (or more times), by changing these parameters in the system.json. * NifflerID: The ID of the current execution. Default is...

pradeeban