ols4
ols4 copied to clipboard
EBISPOT
Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)
The sample request for `/api/ontologies/{ontology_id}/terms/{term_iri}/{property_iri}` given in the [documentation](https://www.ebi.ac.uk/ols4/help) returns a 301 response with zero elements. I suppose that is not intended. ```bash curl -L 'http://www.ebi.ac.uk/ols4/api/ontologies/uberon/terms/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000016/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FBFO_0000050' -i -H 'Accept: application/json'...
Apologies, I'm not sure where best to ask this. In OLS4, is there a web service that is equivalent to the OLS3 "Search terms" web service on: https://www.ebi.ac.uk/ols4/ols3help
I was trying today to work out how your API works using the [webpage](https://www.ebi.ac.uk/ols4/swagger-ui/index.html). However, to me it is not at all clear what input is expected in the "id"...
**Describe the bug** I think that the API to request all ontologies is missing. **Expected behavior** I would expect this to be documented: ``` curl -X 'GET' \ 'https://www.ebi.ac.uk/ols4/api/ontologies/?lang=en&page=0&size=1' \...
**Describe the bug** I am unable to execute the query `/api/ontologies/{onto}/terms/{id}` after trying multiple combinations of `{onto}` and `{id}`. It is unclear whether I am doing something wrong or of...
**Describe the documentation deficiency** Currently there are few related issues wrt Swagger documentation. This can be addressed more generally by updating OLS4 Swagger documentation from OLS3 documentation. **Url to existing...
**Describe the bug** Search ranking on ontologies page does not prioritise exact matches **To Reproduce** Visit https://www.ebi.ac.uk/ols4/ontologies?search=efo Or type efo into the search box under Ontologies. EFO is last in...
**Describe the bug** Tree exploration options for displaying siblings and obsolete terms not working as expected. - ``Show obsolete terms``: when clicked, it does not get ticked (and doesn't show...
**Describe the bug** We have a pipeline which looks at the following endpoint: https://www.ebi.ac.uk/ols4/api/ontologies/GO Comparing this to the OLS3 version (https://www.ebi.ac.uk/ols/api/ontologies/GO), the baseUris entry under the config is now empty,...
Here's the OLS page for the Cell Ontology's term for [osteoblast (CL:0000062)]( https://www.ebi.ac.uk/ols4/ontologies/cl/classes?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000062). The Bioregistry has multiple "providers" for the Cell Ontology. This means that it has URL formats that...
