Dustin Sokolowski

icon company University of Toronto icon location Peter Gilgan Centre for Research and Learning icon location I am a PhD student at the UofT co-supervised by Dr. Goldenberg and Dr. Wilson. I develop and apply bioinformatic tools to analyze sequencing data.

Results 5 issues of Dustin Sokolowski

Gene expression and signaling role seems reversed

2 comment

Hello! Thank you for your excellent tool. I am using CellChat to study EMT in my system and I noticed an odd discrepancy. I saw that the FN1 signalling pathway...

Clarification in input samples

3 comment

Hello! Thank you for the exciting tool and paper. I was interested in looking into applying Bayes-Prism to a non-cancer database with a small sample size compared to TCGA. Specifically,...

Low number of collinear genes

Hey! Thank you for the excellent tool. I am attempting to identify syntenic blocks and tandem duplications between the mouse (mm10) and [naked mole-rat genome that I assembled ](https://rapid.ensembl.org/Heterocephalus_glaber_GCA_944319715.1/) and...

Scaffolding with parental reads

Hello and thank you for the excellent tool. I have a PB + nanopore assembly and 10X linked reads from the parents for trio binning, however I do not have...

"Numbers of contigs are difference," error in "scaff_bwa-barcode"

Hey! Thank you for your great tool. I am trying to use some 10X linked reads to improve the contig assembly of a _de _novo genome completed with oxford nanopore...