DeepSqueak
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DrCoffey
DeepSqueak v3: Using Machine Vision to Accelerate Bioacoustics Research
Dear Dr. Coffey, Sometimes I'll manually check the call type based on the spectrogram, but the relatively low resolution makes some panels too blurred to recognize in my usage. May...
Hi Kevin, One of my students is having an issue loading in detection files and classifying them. She has the newest update of MatLab, all packages installed, and version 3.0.4...
Hello Dr. Coffey, I am trying to optimize call detection using the Rat Detector YOLO V1 network in my rat USV recordings. I was trying to use detection files from...
Hey Kevin, I noticed that the axes in the Clustering GUI were based on contour info, not the stored spectrogram in ClusteringData as it seems to internally suppose. I figured...
**Describe the bug** Deer Dr. Coffey, when I choose the "Export Excel Log (Call Statistics)", DeepSqueak produce a blank excel file. And I have confirmed that the Detected Call File...
DeepSqueak documentation could be improved. - [ ] Create documentation for general workflow - [ ] Create documentation for clustering & clustering GUI - [ ] Create documentation for manual...
- [ ] Optimize automatic contour extraction - [ ] Optimize contour parameterization for k-means clustering - [ ] Optimize VAE based clustering - [ ] Prepare clustering methods for...
DeepSqueak currently detects calls in completed audio recordings. However, real-time spectrogram visualization and call detection would be valuable. - [ ] Allow DeepSqueak to record a real-time signal from an...
I added a couple buttons to allow the user to skip to the next or previous detections mat if that's something you're interested in!
- [ ] Test general workflow - [ ] Test unsupervised clustering & clustering GUI - [ ] Test supervised classification - [ ] Test manual detection review - [...