Stephen Beckstrom-Sternberg issues

Repositories
Issues
Comments

Results 2 issues of


                                            Stephen Beckstrom-Sternberg

Errors running krakenuniq-download - "unexpected end of file" & "dustmasker: command not found"

I ran krakenuniq-download as follows: krakenuniq-download --db krakenU --threads 128 --dust refseq/bacteria $ krakenuniq-download --db krakenU --threads 128 --dust refseq/bacteria Downloading assembly summary file for bacteria genomes, and filtering to...

Smaller DB like Kraken2 Standard-8 or PlusPF-16

Is there a smaller DB available for KrakenUniq, similar to the Kraken2 Standard-8 or PlusPF-16?