ProtST
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DeepGraphLearning
[ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts
Hi! I'm very interested in your work. However, I actually always get problems when runing downstream tasks. I try to run the code with ``` CUDA_VISIBLE_DEVICES=0,1 python -m torch.distributed.launch --nproc_per_node=2...
I greatly admire the creative endeavor that went into the development of ProtST. I have some questions about its pretraining process. After reviewing the code and the paper, I discovered...
Excuse me. I'm trying to reproduce "Downstream Tasks: Text to Protein Retrieval" result you show in paper. However, I met the problem like the issue: [https://github.com/DeepGraphLearning/ProtST/issues/5](url) And I roll back...
Hello again, I tried to run the protein function annotation task after downloaded pkl file. However, I got the following error: RuntimeError: Error(s) in loading state_dict for MultipleBinaryClassification: size mismatch...
Hello! Thanks for your great work! I have tested the zero-shot classification given your released checkpoint and it did a good performance. But I am confused that whether there exists...
Hello, Thank you again for your help in my previous issue. I can finally run the ProtST task on my cluster using one GPU. However, I need clarification about the...
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[ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts