ProtST
ProtST copied to clipboard
Fail to load EC dataset with error: zlib.error: Error -3 while decompressing data: invalid stored block lengths
Hi! I'm very interested in your work. However, I actually always get problems when runing downstream tasks. I try to run the code with
CUDA_VISIBLE_DEVICES=0,1 python -m torch.distributed.launch --nproc_per_node=2 ./script/run_downstream.py --config ./config/downstream_task/PretrainESM/annotation_tune.yaml --checkpoint ./pretrained_weights/protst_esm1b.pth --dataset td_datasets.EnzymeCommission --branch null
However, it always returns error:
zlib.error: Error -3 while decompressing data: invalid stored block lengths
and stops at 92% every time:
So I keep so many times to delete the extrated EC files and re-extract the origin zip file (it really takes a long time), but it still fails eventually and meets the same bug when loading at 92% :( Could u please help me check this error? Thanks.