Dazcam

Error, whilst attempting to use plotMB

2

Hello, I'm experiencing the following error when attempting to visualise my results. Input: plotMB(results = results_homer, rsid = "rs11039266", effect = "strong") Error message: sh: gs: command not found Error...

Manually change root directory after creating BP cell Seurat object

2

Hi there, I have been running an analysis in Seurat 5 that is partially run on a local machine and a remote server. As my Seurat objects were created remotely...

SaveSeuratRds(): Is there a way to alter directory address of 'on-disk' matrices in Seurat object

3

Hello, I have been running an analysis in Seurat 5 that is partially run on a local machine and a remote server, and I've been trying to work out how...

Error in checkSets(MEs, checkStructure = TRUE, useSets = useSets) : No data given.

1

I have a dataset spanning several brain regions, each region having 15-20 cell types. For a single brain region, I have created an independent `misc` slot in my Seurat object...

I'm trying to subset a Seurat 5, BP cells object but I get the following error: ```r cells_keep filter(str_detect(cellIDs, cells_retain)) |> pull(cellIDs) |> unique() |> as.character() seurat_obj Error in check_valid_matrix(x)...