DavidRR24

Results 3 comments of DavidRR24

Does lib_cut only remove samples with a minimum sequencing threshold? Modification of these parameter below the minimum threshold of sequences significantly affects my results.

Sorry for the inconvenience, but I think I found a strange solution. In brief, i got the error when comparing males from two localities “Coquimatlán” and “Chamela” with lib_cut =...

Issue with unclassified taxa Inflating DA analysis at specified taxonomic levels in ANCOM-BC2

I am facing the same situation, in my ANCOMBC2 test many of my differentially abundant taxa are unknow taxa at genus level, if these unassigned taxa are filtered out my...

Issue with unclassified taxa Inflating DA analysis at specified taxonomic levels in ANCOM-BC2

Iam sorry for my delay in my response. I agree with your argument why taxa that have not been classified to a specific taxonomic rank should not be deleted and...