Daniel Rivas

Results 18 comments of Daniel Rivas

So I had the same problem as above. I followed your suggestion of clone and using `fix-git-auth`. It did not work. I get this other error message: ``` Adding and...

I agree! This is the best solution. This way we could keep using Eureka with the errors.

I do have exactly the same issue. That is a good point, however, as it is now (not being able to push) that is the functionality that I can get.

I am having this same issue. Could you share your 'locale' settings, aapit? Thanks

Hi, I have a similar problem. I have been using Diamond, first version v2.0.9, no v2.0.12, on a group to search for sequences on a collection of assemblies. The sequences...

Thanks for your reply. I run 16 CPU threads with 1000G memory, but with less memory (128GB) I could run 28 CPU threads. One of the assemblies uncompressed is 3.6...

For this particular assembly this are the specs: ``` karyotype: 2n=18 contigN50: 107,955 totalContigLength: 3,499,615,818 longestContig: 1,055,336 numberOfContigs: 72,993 scaffoldN50: 524,289,849 totalScaffoldLength: 3,573,327,505 longestScaffold: 747,302,727 numberOfScaffolds: 5,136 ```

I see. I had thought about the second option. Other alternative that I considered was to run each scaffold independently, but I guess this would not work since the problem...

I thought so. I will definitely try extracting ORFs as well. I just had not thought about it.