Daniel Olson

Thanks for reaching out! Some clarifying questions: Are you finding that there are some labeled tandem repeats that are only a single letter? Or are you trying to exclude period...

Hi Scott, By default, ULTRA uses a maximum detectable repeat period of 100, although this can be changed using -p . Increasing the maximum period will increase your total runtime,...

Hello, Thank you for using ULTRA and reaching out! We generally try to avoid overlapping annotations where possible, although there are a handful of edge cases. Here, the change in...

In earlier ULTRA development I found that there were more diabolical edge cases than I would like, especially when using ULTRA with a higher maximum repetitive period. I have a...