Gary Skinner

I keep getting this error, which I am also getting with nanopolish, anyone know how to fix it? HDF5-DIAG: Error detected in HDF5 (1.10.4) thread 0: #000: H5G.c line 460...

The problem I am having seems to be due to an error whilst installing the hdf5 libraries. I haven't ever tried using slow5tools so I am just trying to do...

I get similar errors whilst trying to compile nanopolish. These warnings are arising whilst compiling slow5tools In file included from ../../../test/h5test.h:29, from zip_perf.c:23: ../../../src/H5Eprivate.h:33: note: this is the location of...

I get very similar warnings when compiling nanopolish, and then when I try to use it I get the erros I originally posted. So, it does seem to have something...

Could it be the version of HDF5 I am using? h5cc -showconfig | grep "HDF5 Version" returns: HDF5 Version: 1.10.4

Nanopolish says in dependencies - [libhdf5-1.8.14](http://www.hdfgroup.org/HDF5/release/obtain5.html) compiled with multi-threading support --enable-threadsafe

I resolved it by making sure I was using HDF5 Version: 1.8.14. Now I have run into the issue that nanopolish doesn't support R10 flow-cells yet. I am moving over...