CrossTalkeR

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No CellPhoneDB interacions found in this input.

3

Hi. I was running the following command: cellphonedb method statistical_analysis cellphonedb_meta.txt cellphonedb_countv2.txt --threads 30 --counts-data hgnc_symbol and I was getting the "No CellPhoneDB interacions found in this input." error. My...

ankurnaqib

I was wondering if this CrossTalkeR pipeline could be applied in merged data from two or more 10x runs. I think that this makes more sense in integrated data, where...

algarji

Compare CCIs for more than two conditions

4

Hi team, I wonder if CrossTalkeR can be used to compare three conditions? Let's say, control, disease and treatment. Thanks!

zhanglab2008

Group comparison

2

Hi, I am trying to do the analyse comparing disease to control but i keep receiving this error: R[write to console]: Error in prcomp.default(all_both, center = TRUE, scale = TRUE)...

JDavies95