Cormac Kinsella

`vg call` strips path/contig info from vcf

4

**1. What were you trying to do?** - Produce a VCF from a mapped GAM ``` vg call graph.gbz --pack graph.pack --snarls graph.snarls --genotype-snarls --all-snarls --gbz-translation --gbz > example.vcf ```...

## PR checklist Fixed extraction of KMERCOV, printf worked only for floating point numbers. Awk works both for floats and scientific notation. Also updated the container version (commit hash remains...

The merqury bioconda package has now been updated to include the latest meryl version.

### Description of the bug If demultiplexing is skipped `qcat.nf` isn't run. Nanoplot for example expects .fastq.gz extensions or it will evaluate $input_file to an empty string. If users provide...