Constance

Clustering dada2-obtained ASVs into OTUs with DECIPHER

4

Hello, I have a phyloseq object that I obtained with the dada2 pipeline. I would like to cluster those ASVs into OTUs. For that, I have the following code (just...

Clustering ASVs to OTUs

1

Hello, I'm currently trying to cluster fungal ASVs into OTUs using DECIPHER and speedyseq, using the code example you have online: ``` cluster_matrix