Cmf

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scrub.scrub_doublets() hangs

hey, is there anything update?

Scrublet takes very long time to run

hey, is there anything update?

shuffle -incl: Fall out of -incl include.bed file

@chenludi is there any update? I came across this situation as well

multiple sample version of Annotating cell clusters by integrating single-cell RNA-seq data

I figure this may be associated with scvi but if anyone get ideas? looking forward to your reply @kaizhang