GWASTutorial

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some website is not working

2

hello, the website in 08_LDSC for reference resource is not working how to solve this issue? > 2024-06-24 16:00:50-- https://storage.googleapis.com/broad-alkesgroup-public/LDSCORE/w_hm3.snplist.bz2 Resolving storage.googleapis.com (storage.googleapis.com)... 142.251.42.251, 172.217.160.123, 172.217.163.59, ... Connecting to storage.googleapis.com...

FrederickGri

Mistakes in Finemapping using susieR

1

wangyiyisheng

time out

1

(base) chenlx@PheniX:~/GWASTutorial/01_Dataset$ ./download_sampledata.sh Archive: 1KG.EAS.auto.snp.norm.nodup.split.rare002.common015.missing.zip End-of-central-directory signature not found. Either this file is not a zipfile, or it constitutes one disk of a multi-part archive. In the latter case the...

LXC2

pip installation error

1

Thanks for your amazing package. Have y'all encountered this error when installing tinytimer (from pyensembl)? Collecting tinytimer (from pyensembl==2.2.3->gwaslab) Using cached tinytimer-0.0.0.tar.gz (2.1 kB) Preparing metadata (setup.py) ... error error:...

bwaxse

GCTA-GREML: the X^t * V^-1 * X matrix is not invertible.

2

Hi Cloufield team, it was a struggle for a GWAS newbie like me that finally went to the [SNP-Heritability estimation by GCTA-GREML section](https://cloufield.github.io/GWASTutorial/14_gcta_greml/). Now I have been stuck here for...

Truongphikt