ChloeDG

Thank you Morganx. I had the same problem and fixed with tensorflow 1.15.0 and keras 2.1.5. Legend! Ubuntu 20.04

Opps, I just discovered your suggestions for masking: https://github.com/skovaka/UNCALLED/tree/master/masking I will try that.

I am not sure if masking helped. The regular cas9 reads definitely map to the reference. But we don't see an improvement in yield compared to whole genome sequencing. What...