Chi Liu

So you can view the automatically created sample_table in the result, i.e. `View(meco_module$sample_table)`.

Hi @guianrey Good idea! I will think about it in the next release. Now, if you need to compare these results, you can extract the result (res_diff in the object,...

Hi. Could you please send me your `dataset2` to check it? Please use `save` function to save the data (https://chiliubio.github.io/microeco_tutorial/notes.html#save-function). I am not sure how it hapened now.

Please drag the data in the Github issue page. I can not open the upper link via the email.

It can not be opened for me. Please directly send the data to my email ([email protected]). Thanks.

Hi. I found the weird result comes from the incorrect factor assignment in the 'Host_taxa ' of sample_table. If you print `dataset2$sample_table$Host_taxa`, you can find there are 5 factors, not...

Hi. Could you please attach your `dataset` or `test` object so that I can reproduce your issue? To save it, please follow the steps in the tutorial (https://chiliubio.github.io/microeco_tutorial/notes.html#save-function) and attach...

Hi @milyzhou , I found the reason is there is NaN in "ACE" index in the alpha diversity table, i.e. `test$alpha_diversity`. The temporary solution is to filter ACE or directly...

Hi. For the first issue, I think it is feasible to add ASV as a taxon unit. Thus the input data for lefse will also have each ASV, and the...

Hi. Guille. You are right! The results of Linda and maaslin2 are both paired comparisons. We can not change this format as those are the design of methods. The main...