Chi Liu
Chi Liu
Yes. I also find it. Thanks.
Hi. Sorry on that It was put on hold. Maybe the primary reason is I have no idea about how to extend functional diversity analysis based on the current framework....
Hi These analysis methods can be easily achieved by the microeco package. The primary thing is to convert functional data to microtable object like what we show in the functional...
Hi Penna, Thanks for the suggestion. I have added the parameter `group` in the function cal_process. Please reinstall the package from github and try again. The CRAN version will be...
Hi. You need to recreate the trans_nullmodel object as the `x` is created with previous version. New created object has the new parameter.
Hi. The current orders depend on the orders of rownames of sample_table or colnames of otu_table, not the factor levels. Please try this. ``` library(microeco) library(magrittr) data(dataset) d1
Thanks for your issue. Maybe I should make the factors to be prioritized. I will update it.
Hi. Could you please attach your `t1` so that I can reproduce your issue? To save it, please follow the steps in the tutorial (https://chiliubio.github.io/microeco_tutorial/notes.html#save-function) and attach the compressed object....
Hi. I run those steps and find it is ok. Could you please recreate an R project and try to run these steps again? ``` library(microeco) load("vonjackowski_t1_test.RData") t1$cal_module() t1$get_node_table() meco_module
Hi. This is a message, not an error. The message is inside the microtable class and invoked when no sample_table is provided. The sample_table in t1 is for samples, but...