Lin Cheng

high duplication in hifiasm hic model

2

Hi , I used hifiasm with hifi and hic data to assembly and phased a variety of diploid genomes(~800m for each hap), in general, it's look good for busco in...

Dear haoyu, I have phased my diploid geome with hifiasm by default parameters to get hap1.fa and hap2.fa Then, I `cat hap1.fa and hap2.fa `and `run juicer ` to produce`...

sequence paired identity large than 100%

2

Hi , I test with follow data, but the sequence identity of matrix large than 1 . I don't know how to explan the result... `./famsa -dist_export -pid -square_matrix test.fa...

Hi, I found that the contig number of haplotype 1 from hifiasm are always large contig number of haplotype 2. What causes this? Is there any explanation in the article...