Fangyuan (Chelsea) Chen

医学实验班模板 -

15

## 编译环境 编译的系统：macOS 13.0 TeX 发行版：MacTeX 2023 模板版本：v5.5.2 模板类型：doctor ## 描述问题 医学实验班模板要求中，图、表名及图、表的编号需要改成Arial ，而图注和List of Figures里对应的条目保留Times New Roman 想请教一下这部分该怎么改，非常感谢！！ The name of the figure e.g. “Figure 3.1 xxx” should be in...

clone_opt starts from 2 (ie, clone 1 is missing)

1

After running `run_numbat()`, clones from `nb$clone_post$clone_opt` starts from 2 directly without clone 1. This caused plotting issues downstream, eg, `nb$plot_mut_history()`, which indicates that one of the clone size is zero...

MethodError: no method matching setindex_shape_check(::Int64, ::Int64)

2

Hi, I am running `infer_network( "../expression.tsv", out_file_path="../net.tsv", PIDCNetworkInference())` where `expression.tsv` is a (3000, 497) matrix without header but with gene as index. I get this error as in the title....

Hi, I was trying `dataset.query(attributes=['ensembl_gene_id', 'external_gene_name', 'description'], filters={'external_gene_name': ['PTEN']})` when an error pops out: `BiomartException: Unknown filter external_gene_name, check dataset filters for a list of valid filters.` Not sure if...