Carole Belliardo, PhD
Carole Belliardo, PhD
## Expected Behavior I try to do download database but the commande line give in the manual doesn't work ## Current Behavior error message : ' Invalid Command: databases Did...
Hi iprada, If the tool is dedicated for DNA-seq data from circular amplification or it can be used to identify circular DNAs from WGS data? Can we use HiFi reads...
Description: I'm encountering an issue while attempting to use pplacer to add proteins to my trees. I'm using the following command: ``` singularity run --bind /kwak/hub /kwak/hub/ST_workspace/25_ST23_aricci/tools/singularity/pplacer:1.1.alpha17-0 pplacer -t gp1381.tree...
add HGTrobustness_parsing This script, HGTrobustness_parsing.py, is designed to Facilitate a phylogenetic validation of putative Horizontal Gene Transfer (HGT) events based on a comprehensive analysis involving protein counts and taxonomic ratios...
## Expected Behavior I try to use easy-linsearch and linsearch but both have same issue : empty files First, I have try easy-linsearch with the line : "$ mmseqs easy-linsearch...
Hi, I tried to run your workflow on a dataset that was maybe a bit huge: 2x100Go of reads and 29Go of contigs. The job fails with the following error...
Hi BBuchfink, I regularly use this tool, and it usually works fine. I'm encountering an issue while using Diamond on a custom database that is 609 GB in size and...