CellNet

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cn_salmon Error:arguments implying differing number of rows

8

Hi, I'm running CellNet following the Nature Protocols paper, after downloading the example data from srp059670, I tried cn_salmon(stQuery) command, however error occured as followed: determining read length. Trimming reads....

dliu201304

I get an error while running: > cn_barplot_grnSing(cnRes,cnProc,"fibroblast", c("fibroblast","kidney"), bOrder, sidCol="sra_id", dlevel="description1") Error in data.frame(sample_id = sample_ids, description = descriptions, : arguments imply differing number of rows: 0, 1 The...

hoichman

Hi, Thank you for developing CellNet. I wanted to ask about your opinion in using this tool for generating NIS scores using scRNA-seq data. Basically, by replacing expList by its...

ilibarra