Carlo Fisicaro

icon company Peptone icon location Bellinzona, CH

Results 11 issues of Carlo Fisicaro

Fix ESM1v inference model input

Retrain inference model with 1280 dimension

bug

Change brmid in p_name

enhancement

Train a model on chezod (1325 + 117)

feature

Github action to update the adopt docker container after each release

feature

Separate examples from scripts

enhancement

Add stability plot

feature

Standardise inference phase.

In `inference.py` we currently have: - `torch.load(str(repr_path) + "/" + ix + ".pt")["representations"]` for `esm-msa` - `torch.load(str(repr_path) + "/" + ix + ".pt")["representations"][33]` for the other models

enhancement

MSA extract script with GPU support

feature

Add viz routines

1 comment

Viz routines for paper reproducibility

feature

Web server integration

feature