Carles Borredá
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4
issues of
Carles Borredá
Hi I recently used SVTyper to genotype a big dataset. To do so, I splitted the dataset in several files with 10000 VCF entries each. I did a simple wc...
Hello Is there a way to tweak the MaxMQ0Frac filter? I'm finding a lot of 'insertions' around recently inserted mobile elements, as they are repeated and reads spanning thorugh their...
Hello! I'm trying to use Mash to assess genetic distance between several distant plant species. We have them sequenced by Illumina and I've used Mash to sketch my read files...
I've read the paper for kmer-db and I weren't able to find anywhere whether kmer-db uses a seed for minhashing during the build step. I've ran kmer-db build twice (from...