BodenmillerGroup

Results 8 repositories owned by BodenmillerGroup

ImcSegmentationPipeline

80
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34
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A pixel classification based multiplexed image segmentation pipeline

cytomapper

32
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8
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R package for visualization of highly multiplexed imaging data

histoCAT

55
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18
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Histology Topography Cytometry Analysis Toolbox

imctools

22
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15
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Tools to handle IMC data

steinbock

26
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8
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Dockerized multi-channel image processing framework

xtiff

20
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2
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A tiny Python library for writing multi-channel TIFF stacks.

imcRtools

20
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8
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An R package for handling and analysing imaging mass cytometry data

IMCDataAnalysis

26
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10
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R based workflow for multiplexed imaging data