BioComSoftware

Results 12 comments of BioComSoftware

Ah. I just realized that TargetInfo is not a subclass of the luigi.Target classes. I think my answer is to subclass targetinfo and not luigi.LocalTarget

Ive tried a couple of variations of the above and, while some of them are allowed by Luigi or sciluigi...none of them allow me to actually pass the parameter at...

OK. Nevermind :) It works if I use the command line with 'luigi etc etc'. I was trying to get it to run from "if __name__ == __main__" :) If...

So, I reopened this instead of creating a new issue. While I am able to pass in parameters from command line, I'm still looking at addressing the issue of the...

Hi Samuel, Thanks for touching base. On Q1...I don't necessarily see a better reason for it. It was just a way to reduce code from two lines to one -...

P.s. Re: "Notice in the second script, I removed the references to MyFooWriter.out_foo from the MyFooReplacer.run()...so that there's no hardcoded references in MyFooReplacer to MyFooWriter " Just to make sure...

@mwatts15 @slarson Can someone elaborate on the start position for this, and then functional end goals? I've found the PyOpenWorm repository, and see both files.

Note: Dropping the two large DICT fields, "reportableinformation_json" and "audittrail_json" results in the identical error, including the memory size of 2817560004071633 `MemoryError: Unable to allocate 20.0 PiB for an array...

Hi @fabclmnt Thanks for the input. **I did try the run with the reportableinformation_json (dict) and audittrail_json (dict) removed**, and it still errored (with the exact same memory count BTW)...

So, the best I could glean form the internet is; Windows simply doesn't allow for memory overcommit. I moved to working on an Ubuntu 20.04 system, [enabled overcommit](https://www.baeldung.com/linux/overcommit-modes), and created...